Insertion junction: CLIP2.061545_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061545
Chromosome:chromosome 1
Location:7717614
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g054300 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCGCTGGAACAGCGCCCCGTCCAAGAACCCCGTGAAGAATCCAGCAT
Internal bar code:AACAGTTCTTTTGTCATGCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1595
LEAP-Seq percent confirming:86.3014
LEAP-Seq n confirming:126
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:146

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGCGACTTGTGACGTTA
Suggested primer 2:GATAGTTCCAAGCTTGCGCG