Insertion junction: CLIP2.061545_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061545
Chromosome:chromosome 1
Location:7717633
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g054300 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCATCAGCGCCACGCGTGCGACCTCATCAACGTTTGCAGACGCGCGG
Internal bar code:TCTCATGTGACAACATCCTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2787
LEAP-Seq percent confirming:34.188
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:77
LEAP-Seq n unique pos:117

Suggested primers for confirmation by PCR

Suggested primer 1:GATAGTTCCAAGCTTGCGCG
Suggested primer 2:TCACGCGACTTGTGACGTTA