Insertion junction: CLIP2.061555_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061555
Chromosome:chromosome 3
Location:1117972
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g148800 (1 of 1) 2.1.1.4 - Acetylserotonin O-methyltransferase / Hydroxyindole O-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACCAGTTCACGCTTTCATACATACGGTACACACGCCAACACGCTTGCG
Internal bar code:ATTCGTGATTCCGGCTGCCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1028
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GTGACAAGGAAACGGTTGGC
Suggested primer 2:AACGCCACGAAACTTCAACG