Insertion junction: CLIP2.061561_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061561
Chromosome:chromosome 15
Location:5691240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g143307 CLPC1 (1 of 1) PTHR11638//PTHR11638:SF96 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED; ClpC chaperone, Hsp100 family 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGCTCTGTAACGCCCTGTTCATCGCCTGGGTTGCCAGGCTGGTCACA
Internal bar code:TTATATAGTACAGCACCAATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3869
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AACTGCATGTCCGAGAACGT
Suggested primer 2:CTAGGTGGTGGAGGCTAGGT