Insertion junction: CLIP2.061568_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061568
Chromosome:chromosome 17
Location:3893141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g727700 HEL65 (1 of 2) K16911 - ATP-dependent RNA helicase DDX21 [EC:3.6.4.13] (DDX21); DEAD box ATP-dependent RNA helicase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATAAGTGCTTGCGGCGGGGCAGCAAGGTCGAGGGCTATGTGCGGTACGG
Internal bar code:CGTCGATCATTTTGGCTTGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1510
LEAP-Seq percent confirming:80.7692
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAAACGCGTGCTCCAGTA
Suggested primer 2:CGGTCGCGACTCATACTACC