Insertion junction: CLIP2.061571_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061571
Chromosome:chromosome 2
Location:7638982
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g147700 (1 of 1) PTHR11271//PTHR11271:SF33 - CHLOROHYDROLASE FAMILY PROTEINS // SUBFAMILY NOT NAMED 3'UTR
Cre02.g147750 FAP209 Flagellar Associated Protein 209 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTGGACTTCAAGCCCCGATGCAAAGGCTGGAACATAGCGGGGCATGC
Internal bar code:CTTCAATTTGGCTCTGTTTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:901
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GAACACCAACACGAACACGG
Suggested primer 2:ACCCCCTCTTTCCCTTCCTT