Insertion junction: CLIP2.061578_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061578
Chromosome:chromosome 5
Location:1209790
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241632 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGACTCCTAGAGCCCTCCGAACATGCGGGTTTGGCTGGTGCAACCTCCG
Internal bar code:GATGTACTAACGCGGTTGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2218
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGAGGTAGACGCTTGCG
Suggested primer 2:TAGTGCTGGAAATGCCTGGG