Insertion junction: CLIP2.061578_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061578
Chromosome:chromosome 5
Location:1209900
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241632 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCAGCGTGGTTTGGGCCTAGGAGGAGAGGGTCTGCGGTGTCGTACGGC
Internal bar code:GATGTACTAACGCGGTTGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:722
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TAGTGCTGGAAATGCCTGGG
Suggested primer 2:AGATGAGGTAGACGCTTGCG