Insertion junction: CLIP2.061586_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061586
Chromosome:chromosome 9
Location:3406928
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395732 (1 of 5) IPR000104//IPR001623 - Antifreeze protein, type I // DnaJ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCCATGATTGCTGTGCAGCAGTGCAGCTTGACCGGCCTGGTGTTCCC
Internal bar code:CTATAAAGTGCAGTCTGGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2344
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TATGCTTTCCCCCGTGAACC
Suggested primer 2:TGTTTGGCTGTGTGGTGACT