Insertion junction: CLIP2.061590_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061590
Chromosome:chromosome 14
Location:608915
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g611900 3'UTR
lncRNA_TCONS_00189627 3'UTR
lncRNA_TCONS_00191355 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTAATGTTGGGGCCACAGGCTTCGCCGCCACGTCGCGGCTCCGCATCC
Internal bar code:ATTCATAACAGGCCATAAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2072
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTCTGACGTCACAACTC
Suggested primer 2:ACCGCAGTACAATGTCGTGT