Insertion junction: CLIP2.061596_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061596
Chromosome:chromosome 16
Location:5382253
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683100 (1 of 239) IPR016024 - Armadillo-type fold outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCACTTACGTAGCTACCACGCAGCCAGCCTGACAACCAATCCTAAAGG
Internal bar code:TAAGGCAAGCAGGTTAACTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2531
LEAP-Seq percent confirming:91.5493
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCATGTGTCAGGACGTT
Suggested primer 2:CTCTGAGAGCAACCCAGTGG