Insertion junction: CLIP2.061596_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061596
Chromosome:chromosome 16
Location:5382261
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683100 (1 of 239) IPR016024 - Armadillo-type fold outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTGGTTCTGTGGTTGTGTTAAACAAAATAGTACCATGACTCCATCCAG
Internal bar code:TAAGGCAAGCAGGTTAACTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2619
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTGAGAGCAACCCAGTGG
Suggested primer 2:ATGGCATGTGTCAGGACGTT