Insertion junction: CLIP2.061603_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061603
Chromosome:chromosome 17
Location:1811004
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g709050 HTR3,HTR28 Histone H3; (1 of 35) K11253 - histone H3 (H3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAACACCGAGTTTTTTGGTTGCGCCTCCCGCTACCGTCACGCCCGAAA
Internal bar code:AGGAAGTGGGGATTGACAACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:161
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTGACCAGACGTTGAAC
Suggested primer 2:CCGTGACCTGCACTACTGTT