Insertion junction: CLIP2.061605_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061605
Chromosome:chromosome 11
Location:175167
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467544 IDI1 Isopentenyl-diphosphate delta-isomerase; (1 of 1) K01823 - isopentenyl-diphosphate delta-isomerase (idi, IDI) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGTTGGTAATCACTCGTCTGATTTGCCAATGGCGCGTATTATGTCGG
Internal bar code:CGAGCGGTCCGCGGGAACCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:397
LEAP-Seq percent confirming:13.1579
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTCGTACCTCGCCTCACC
Suggested primer 2:GGATTGTGTTGGCGCTGTTT