Insertion junction: CLIP2.061606_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061606
Chromosome:chromosome 3
Location:8996126
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g203457 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTTGACTGGTTGGGTAGGCTCGGCTGGTGGTGTAGGCTTGACTGGTGG
Internal bar code:TTCGTGCGAAACTTGCGAGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:172
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACAATGAGTACCCCACA
Suggested primer 2:CGGAACACACACACACACAC