Insertion junction: CLIP2.061608_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061608
Chromosome:chromosome 1
Location:8063510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g062172 HBV1 (1 of 27) K11252 - histone H2B (H2B); Histone H2B variant 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAACGAGTATGGAAAGAGTTTAATAACAAACAACGCGAAGAGAGCTTT
Internal bar code:TACGAGATTGAGCATTCGAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1816
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCAGTTTGTGTTTCGCC
Suggested primer 2:TCGTTGGCCATCTTGTCGAA