Insertion junction: CLIP2.061608_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061608
Chromosome:chromosome 1
Location:8063516
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g062172 HBV1 (1 of 27) K11252 - histone H2B (H2B); Histone H2B variant 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTGACACTATAACAAAATGGCTCCCAAGGCTGCTGAGAAGGCTCCGG
Internal bar code:ACGCGGTTAAAGTACTATCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3740
LEAP-Seq percent confirming:98.9583
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTTGGCCATCTTGTCGAA
Suggested primer 2:ATGGCAGTTTGTGTTTCGCC