Insertion junction: CLIP2.061610_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061610
Chromosome:chromosome 13
Location:506521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g565200 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAATCCCTCGCGTAATACACACAAGAAGACATCCGTCCATACATGCTT
Internal bar code:CTAGGTTGTTCCCGAACATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:484
LEAP-Seq percent confirming:44.6429
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTGTGGATGGGGATGGG
Suggested primer 2:GTTTGCGCCAGTATGCTACG