Insertion junction: CLIP2.061618_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061618
Chromosome:chromosome 7
Location:1225235
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g321550 BLZ5,SOR1 bZIP transcription factor; (1 of 10) PF00170 - bZIP transcription factor (bZIP_1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGACCAACTATGGGGCAGGAAGTCAGTCAAGAGCTGTGTCTAGAAAGAT
Internal bar code:CTGCATTCGGATCTCCGTGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2937
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:102
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:114

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGGTCCCCGAAAACACG
Suggested primer 2:AGCTCCGCCAGTTCATCAAA