Insertion junction: CLIP2.061623_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.061623
Chromosome:chromosome 6
Location:8212763
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g306300 CHLI1 Magnesium chelatase subunit I, isoform 1; (1 of 2) PTHR32039:SF9 - MAGNESIUM-CHELATASE SUBUNIT CHLI-2, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCTGATAACCCTCTAGCTCATGCCTCTAGCTTCAGGTGAGACCTCGC
Internal bar code:ATTGGGCCGGCACGTGTTAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3400
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGGCCTATTCTGCAATG
Suggested primer 2:AGGCCATGTTAATGCCTGCT