Insertion junction: CLIP2.061624_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061624
Chromosome:chromosome 6
Location:42055
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g248900 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCATTTGGGAGCACAGGAGCAGAAGCACCCCCATTCGGGGACCAAAC
Internal bar code:CGATGTGCTTTCCGCTCCATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:6452
LEAP-Seq percent confirming:98.5401
LEAP-Seq n confirming:135
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:137

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAAGCAAAGTCCGCAACG
Suggested primer 2:GCGATACACGTCCTCCGAAT