Insertion junction: CLIP2.061626_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061626
Chromosome:chromosome 7
Location:3535229
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336350 (1 of 1) PTHR24012//PTHR24012:SF432 - FAMILY NOT NAMED // HEPHAESTUS outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGGATGCCCCTGGGGAATCGGTTGCATTCACCCTAACAGTCAGCGCC
Internal bar code:TAGCGGTTGGCATGTGATAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:5951
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:187
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:187

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTGAGCACTTCCTGAGT
Suggested primer 2:GGGGGCTGAGATCATAACCG