Insertion junction: CLIP2.061630_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061630
Chromosome:chromosome 17
Location:2541800
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715900 Similar to Dihydrofolate Reductase-Thymidylate; (1 of 1) 1.5.1.3 - Dihydrofolate reductase / Tetrahydrofolate dehydrogenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCCTATGGCTTAATGGATAAAGCGCCGGTCTACGGAGAATAAGCTGTG
Internal bar code:GAGGTGTCTCGTCGTAGGGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1293
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTAGGATCGTTTTGGCCC
Suggested primer 2:CAGCCATGTCCATTCATGCG