Insertion junction: CLIP2.061631_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061631
Chromosome:chromosome 2
Location:7160516
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g390356 (1 of 1) PTHR22849//PTHR22849:SF0 - WDSAM1 PROTEIN // WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 intron
Cre09.g390393 (1 of 5) PF01713 - Smr domain (Smr) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAAGTCGGTAGATGGTTGAATATGTCTGTGTCGCTGCATCGTCGCTG
Internal bar code:TGCGCCGCGAACACTCAAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3446
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTGCTACTTCCGCTTCC
Suggested primer 2:CTGGTTTGCCTATTTCCGCG