Insertion junction: CLIP2.061643_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061643
Chromosome:chromosome 3
Location:4347084
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174600 (1 of 3) PF13771 - PHD-like zinc-binding domain (zf-HC5HC2H) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCACGGAAGCCGGCCAGCAGGGCGGAGCCTTCTTTGCCCACGCAGCCTC
Internal bar code:ATTTGGTTTGACCTCATCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1521
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTATGCAGCCGTTGAGC
Suggested primer 2:CCAAGCAAGCAGATACGTGC