Insertion junction: CLIP2.061645_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061645
Chromosome:chromosome 16
Location:1505962
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g653050 (1 of 3) 2.1.1.200 - tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase / TrMet(Xm32) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTACCACGTTCACCGTACGGCACATATCGTGGACTGTGCGCCATCCGCC
Internal bar code:TGGATAGGGCCCCTCGTTACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2147
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCACGGACAAGTGAGTG
Suggested primer 2:TTCTTGGAGTCGGAGCAACC