Insertion junction: CLIP2.061649_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061649
Chromosome:chromosome 5
Location:1515445
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234658 (1 of 1) PTHR13480:SF0 - E3 UBIQUITIN-PROTEIN LIGASE HAKAI 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTGTCGAGGCGTGAAGGCTTGAGCAGTGGCAGCAGGTGGCTTGCGTTG
Internal bar code:GCGGTGTGGCGGGGGGTGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1167
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGATGTTGGAATGCTGG
Suggested primer 2:TGTGATGTCGGTGATGGGTG