Insertion junction: CLIP2.061653_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061653
Chromosome:chromosome 12
Location:6236707
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g536150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACAAGGAGGTGGCTGCCTTAGGGAGGCAGGAAAAGGGCTGAGCCCTCC
Internal bar code:GTGTTTGTTCGCGACGGTACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2815
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCCAGTCCTGTGGCAAC
Suggested primer 2:ATCGAAGTCACGGCAACAGT