Insertion junction: CLIP2.061658_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061658
Chromosome:chromosome 7
Location:2968690
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g333000 CEP4 (1 of 1) 3.4.22.15 - Cathepsin L; Cysteine endopeptidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTTGTTATTGCCTATTGCATGTAAATAGGCGGCGGGGAAAATTCGGGC
Internal bar code:CAGTGCGTCGACAAATACCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3709
LEAP-Seq percent confirming:82.1429
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:GACAAACCAACGAGCCACAC
Suggested primer 2:CGGACGGGGAGATGAAGATG