Insertion junction: CLIP2.061661_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061661
Chromosome:chromosome 13
Location:5200366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g607500 KU70 ATP-dependent DNA helicase 2 subunit KU70; (1 of 1) K10884 - ATP-dependent DNA helicase 2 subunit 1 (XRCC6, KU70, G22P1) 3'UTR
Cre13.g607550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGCGGGATGGGGGAAGACACGGCGTGACGTGCAACTCGGGTGCAAAC
Internal bar code:CTGACGTTACAACGTTTACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1319
LEAP-Seq percent confirming:82.5
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCGTGTGTCATATGCAAG
Suggested primer 2:CTCACACACACAGCAAGCAC