Insertion junction: CLIP2.061663_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061663
Chromosome:chromosome 7
Location:5251478
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349350 5'UTR
Cre07.g349400 (1 of 1) PF10175 - M-phase phosphoprotein 6 (MPP6) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACGGCATTGTGGGCACGGAAAACTAGAATGGGGAGGCTCATTCCTTG
Internal bar code:GTCCCTTTTTCTTGCTGGTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2632
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTCATCAAGCCCCGAACA
Suggested primer 2:GCCCCTGTCTTCTTGACTCC