Insertion junction: CLIP2.061666_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061666
Chromosome:chromosome 16
Location:4069818
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690500 NHP2 Nucleolar protein, Small subunit of H/ACA snoRNPs; (1 of 1) PTHR23105//PTHR23105:SF61 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGTGATGGTCCACTGCAGGCCAGCAGAACATACCATCACTGAAGGCA
Internal bar code:ATATTGCTCGACGGAACTTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3052
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:127
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:127

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGCTGCTTGTGTGTGGTG
Suggested primer 2:CACGTCAAGGGCCAAACTTG