Insertion junction: CLIP2.061677_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061677
Chromosome:chromosome 9
Location:5054951
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g406000 BPL1 Biotin-protein ligase; (1 of 1) 6.3.4.11//6.3.4.15 - Biotin--[methylcrotonoyl-CoA-carboxylase] ligase / Biotin--[methylcrotonoyl-CoA-carboxylase] synthetase // Biotin--[acetyl-CoA-carboxylase] ligase / Biotin--protein ligase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAATACCAACAGGTACCAATCTGGTAGCACCTTTTGATTTGATCGCC
Internal bar code:TTACTTGAGGTTCCCTGTCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1228
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:AAACAACGAAACGAAGCCCG
Suggested primer 2:GCGTCTAGTCGTCTGCTACC