Insertion junction: CLIP2.061686_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.061686
Chromosome:chromosome 13
Location:2296403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578700 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAATTAACCTGGTCGCCACCTGCACGGCAGCCAATGCTGCACCTCGC
Internal bar code:AGAGCTTACTGGGACGTTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1798
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GATTGTGTGATGTCGCGTCG
Suggested primer 2:TTGAGGCGTGTGCAATTGTG