Insertion junction: CLIP2.061694_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061694
Chromosome:chromosome 12
Location:2555196
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g506850 (1 of 2) PTHR10183//PTHR10183:SF323 - CALPAIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGGAGGTGTCAGGTGGGTGGGCGGGGGTGTTGGGTGCGACAGGTGTG
Internal bar code:AGTGTGTGTGAATAGACTAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:160
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TCACACAGGAGTCGTTCACG
Suggested primer 2:CGCCTCAGTTGGAGTTGACT