Insertion junction: CLIP2.061697_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061697
Chromosome:chromosome 13
Location:1900335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575800 IGS1 Indole-3-glycerol-phosphate synthase; (1 of 2) 4.1.1.48 - Indole-3-glycerol-phosphate synthase / Indoleglycerol phosphate synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTGGGAGAGGGGTGGTAGATACCAGCCCAAACGACTACGGGGCGCAG
Internal bar code:TAGTAGCGTTGCCCGGACAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1498
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCTGCTGTTACTTCCGT
Suggested primer 2:TGTGCGGGAAGAGACAAGAC