Insertion junction: CLIP2.061700_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.061700
Chromosome:chromosome 5
Location:2687998
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre36.g759597 (1 of 2) IPR001841//IPR013083//IPR024766 - Zinc finger, RING-type // Zinc finger, RING/FYVE/PHD-type // Zinc finger, RING-H2-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGAATGTCGGGGTCTGGGACTACCGGTACCGTACACTGCACACTCTGT
Internal bar code:CGCCGTGGTGAATAGGCTAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:602
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTGTGTGTGAGGCAGAT
Suggested primer 2:ATGCTGGAGTGTGGTGATGG