Insertion junction: CLIP2.061703_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061703
Chromosome:chromosome 12
Location:5874466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533450 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTGGTCCCAGTGGGATGATGGGTACAGGAATGGCCCAGGATGCGCCAG
Internal bar code:GCTACCTACTTTGCCGTTTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4854
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGAACCCTGTCCCATCAC
Suggested primer 2:AGCCCAGTCCTCCTCATCAT