Insertion junction: CLIP2.061705_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061705
Chromosome:chromosome 16
Location:3273580
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g666250 TPT26,TPT27 (1 of 2) K15281 - solute carrier family 35 (SLC35D); UDP-N-acetylglucosamine transporter 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGGGGGAAAACTGAGGGGCGACCCCAAATTGGCCCACCGGGCCGCGA
Internal bar code:ATGGTAGGTGTGTTTGTGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4286
LEAP-Seq percent confirming:80.597
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:GTAAGAGGCCGATTCCCGAG
Suggested primer 2:TGGGGTTCATGACATGGCTC