Insertion junction: CLIP2.061707_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061707
Chromosome:chromosome 9
Location:6322674
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414150 GT90F42,GT90-42 GT90 family protein 42; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAACATGTCCAGGGGCAGTCCATGTTGTGTCACTGCCACTCGTTACAAG
Internal bar code:ATTTTAATGAACTATGAAAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:321
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGAGCATATGGGCGTCA
Suggested primer 2:AGATGCGTCCGGTTCAGTTT