Insertion junction: CLIP2.061714_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061714
Chromosome:chromosome 8
Location:1240932
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g363450 (1 of 2) IPR003034//IPR009061 - SAP domain // Putative DNA-binding domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTCCAGCTGTTGAACGCCACCGAGCGTGAGATAGCCGGTGTACCCGC
Internal bar code:TTCAAAAATTTTTATAGCTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1860
LEAP-Seq percent confirming:97.8723
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CTTAATGTCCGGCTGCATGC
Suggested primer 2:GCTGGCTCTGACTTCACCAT