Insertion junction: CLIP2.061716_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.061716
Chromosome:chromosome 3
Location:2749686
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g161363 (1 of 30) IPR000253 - Forkhead-associated (FHA) domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGATGTGAAAAGAGCTACGCTTAGCACGGAGGTGCAAAAGATGGCGGC
Internal bar code:GAGTACAAATCAAAATCGTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1713
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAATGTGGAGGTGCTCGA
Suggested primer 2:TACTAGCTGGGCACAAAGGC