Insertion junction: CLIP2.061734_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.061734
Chromosome:chromosome 10
Location:1647568
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g429500 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGTAGACCCACAGCGTCCCACTCTACAGGACCTTCCATAGGAGGAAGC
Internal bar code:TGTATTCGGATAGTTGTCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4155
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGCGATTTTTGCTTGGG
Suggested primer 2:GGTGGAGTGTTGGTCGATGT