| Insertion cassette: | CIB2 |
| Side of cassette: | 5' truncated? |
| Strand: | - |
| Strain: | CLIP2.061737 |
| Chromosome: | chromosome 4 |
| Location: | 1780374 |
| Confidence (%): | 80 |
| Locus systematic id | Locus common name | Defline | Feature |
|---|---|---|---|
| Cre04.g800462 | (1 of 1) IPR020996 - Type III secretion system, AvrPto | 3'UTR_intron |
Insertion site details | |
| Expected flanking sequence (starting at cassette; orientation from cassette outwards): | AAGGTCGCTGACGCCCACTTGCCTGCCCGCCCCAGCAGCCCCCAAGTGCC |
| Internal bar code: | TTAAGAACTAGGTTATCATCGA |
Confirmation - LEAP-Seq | |
| LEAP-Seq distance: | 1239 |
| LEAP-Seq percent confirming: | 100.0 |
| LEAP-Seq n confirming: | 18 |
| LEAP-Seq n nonconfirming: | 0 |
| LEAP-Seq n unique pos: | 18 |
Suggested primers for confirmation by PCR | |
| Suggested primer 1: | CAAGCAGTAGCCACCAGTCA |
| Suggested primer 2: | GTTGGAGTTGGATGGGGAGG |