Insertion junction: CLIP2.061743_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.061743
Chromosome:chromosome 17
Location:1744319
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g708550 HTA20,HTA27 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAACAAACTCGGTGTTTCTCAACACCACCATCACTTGGTTGACACGGC
Internal bar code:TTTGCCTTTCGTTCGTGTCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3283
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTGGGGCTTTATGACGA
Suggested primer 2:GAGCGGTTGTTTGACCCAAC