Insertion junction: CLIP2.061748_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.061748
Chromosome:chromosome 3
Location:750031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146027 (1 of 274) IPR020683 - Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCCGCCAGCCTACCCCCACGGCGTGCTTACCCCTGTGCAACATGGCC
Internal bar code:TAGTCTATTTCTCATTGTTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:624
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTGACGCACATGTGTAT
Suggested primer 2:GCGTGTGTGTACAGTCTGGA