Insertion junction: CLIP2.061761_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.061761
Chromosome:chromosome 17
Location:2646748
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716750 (1 of 77) IPR029071 - Ubiquitin-related domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGAGGAGTCCACAGTCATGGCGCAGAGATCCGTCGGTCGGCATGGTAT
Internal bar code:TATTTATACGTGGCTGTTGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:753
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAAAGGCACAACCGAAG
Suggested primer 2:CTATGCTACGGCGTTTGTGC