Insertion junction: CLIP2.061762_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.061762
Chromosome:chromosome 3
Location:9096783
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g201439 (1 of 1) PTHR22778//PTHR22778:SF0 - OVARIAN CANCER GENE-2 PROTEIN-RELATED // OVARIAN CANCER-ASSOCIATED GENE 2 PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCGGACACAGACACACGGACACGGGTACGGGGTGGAGGACCCGCCGGG
Internal bar code:CAGGGTTACGAGTATGCCTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:681
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTGTTGTTGCAGACCAG
Suggested primer 2:CAATGCAGCACACACACACA