Insertion junction: CLIP2.061768_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.061768
Chromosome:chromosome 6
Location:7514406
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g301100 (1 of 5) PF04232 - Stage V sporulation protein S (SpoVS) (SpoVS) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACATACGGAGGCGATGAAATCTCCTGTCATAGCTCTTGGCGCTGTGCAC
Internal bar code:ATATATCAGGGGAATCCAAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2300
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:TAACCCGTCATGTCAACGCA
Suggested primer 2:CAACGCTATGCCCTTGATGC