Insertion junction: CLIP2.061781_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.061781
Chromosome:chromosome 12
Location:1272404
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g489650 (1 of 6) IPR002557 - Chitin binding domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCACGCGGCCACTTGTGGCGGGTCGTCGTCCCAACCAAGACTCCGACC
Internal bar code:GTGCAGCGCTCGGGTGCATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1525
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAATGAGCTCATGCAAGC
Suggested primer 2:AATAGTAGGGCCGACATGCG